Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015934420.1_cds_XP_016480503.1_71924
CDS Infomation

[gene=LOC107801655] [db_xref=GeneID:107801655] [protein=flap endonuclease GEN-like 1 isoform X2] [protein_id=XP_016480503.1] [location=join(20842..21039,21389..21565,22330..22500,23301..23482,23634..23880,23981..24110,24671..25140,25248..25484)] [gbkey=CDS]
Sequence

ATGGGGGTGGTTGGAAACTTCTGGGAATTGCTGAAACCGTATGGTCGAGCAGAAGGGTTT
GATTTCTTGAGAAACAAACGTGTAGCAGTGGACTTGTCATATTGGATCGTTCAGCAAGAA
ACTGCAGTACTCAAAGCCCACATTCGTAATCCTCATATAAGACTCACTTTTTTCCGTACC
ATCAATCTCTTCTCTAAGTTTGGGGCATTTCCCGTTTTCGTCGCAGATGGTACTGCATCA
CCGCTAAAGTCTCAGGCAAGGATTGCACGCTTTTTCCGGGCATCAGGAATTAAATTATCG
AGTTTGCCAGCGGCTGAGGAGGGCATTTCAATTGAAAGGAACAAGGCATTTCAGAAATGC
GAACAAGAATGTGTGGAGCTTCTTGAACTACTTGGGGTGCCAGTCCTAAAAGCAAAAGGA
GAAGCTGAAGCACTCTGTGCACAATTGAATCAAGAAGGACAAGTTGATGCTTGTATTACT
GCTGATAGCGATGCATTTCTTTTTGGAGCCAAATGTGTTATAAAAAATATCCAACCCAAC
TCCAAAGAACCACTTGAGTTCTATCACATGTCAGATATTGAGTCTGGTCTTGGGCTGAGG
AGGAATCACTTGATAGCAATTTCACTTTTGGTAGGAGATGACCACAACTTGATTGGTGTG
CCTGGAATCGGACTTGAAACAGCACTCCGTTTCGTCAAATCTTTCAGTGAAGATGAGATC
TTGTCTAGGTTGCAGGAAATAGGCAGAGGGGATGTACAGGTGCTTCAGCGTGATGTCAAC
TTAGACTGTAATTATATACCCGGTTCAGATGAGAGCCCTTGGAAGACCAAAGTGCAACAC
TGTTCGTTCTGTGGGCATCCTGGTAGCAAGAAAGCTCACCACAAGTTTGCTTGTCAGGAT
TGCAGTTCCACTGCCAACGAGGGTTGCATTCAGAAACCATCGGGCTTCAAGTGTAATTGT
TCCTCGTGTGATTTGGATAATAAAGAAAAAGAACAGAAAAGAAATGAGAATTGGCAGATT
AAAGTTTGCAGAATGATCGCCTCGGAGCAGAATTTCCCAAACAATGAGATTACAGAAATG
TACTTGAACAAACACCAGCAGTCTGATGGTGATTATCATTTAACATGGTCAAGTCCAAAG
ACAGATATGCTAGTTGATTATCTGGCTTATTATCAGCACTGGGAGCCATCTTATACACGA
CAAAGAATGCTTCCTATGTTATCCACCATATTTCTAAGAGACGTGGCCTCAAATTCAAAA
GATCAATTGTTATGCGGACAGTATGAATTTGATTCCATTCAGCGGGTAAAGACAAGATTT
GGACATCAACTTTACGTAATCAATTGGAAGAAAACGACACGTGAAATGAGCAATGAAATC
TGCATCCCCTCTGAAAACCCTGATATGGAGCAGGAGCTGAGGATAGCTGATGACGGGTCG
AAAGATTTGCTCGATGAGCCTGAGGTTCTACAGATTCATATCAAGGACGGATGCAGCTTT
TTATCAACTGAAGAAGATATGGAGCTTGTACAGAGTGCTTTTCCAGAAAAGGTTTCCCAG
TTCTTGAGAGATAAGGAGCTAAAAGAAACAAAATCAAGTAGAAAAAGATCAGTGAAGCCT
GAAAATTCAGAATCACCGAGAGGCGTTCAACCCAGCATCACCAACTTCTACCGATCATCC
AAAGTCCAGGCAACGCCTGGGGAGAATGAATCTCGAAGTTCCAAGATTAGTGCGGATACT
TCTGGAGAGAGAGATAAAGAACCCATCCGAAACTACTCCAAGTCTGCTAGACGCAAGCTT
TTGTTCGGTTAG

Peptide Sequence

PEP ID

XP_016480503.1
PEP Infomation

PREDICTED: flap endonuclease GEN-like 1 isoform X2 [Nicotiana tabacum]
Sequence

MGVVGNFWELLKPYGRAEGFDFLRNKRVAVDLSYWIVQQETAVLKAHIRNPHIRLTFFRT
INLFSKFGAFPVFVADGTASPLKSQARIARFFRASGIKLSSLPAAEEGISIERNKAFQKC
EQECVELLELLGVPVLKAKGEAEALCAQLNQEGQVDACITADSDAFLFGAKCVIKNIQPN
SKEPLEFYHMSDIESGLGLRRNHLIAISLLVGDDHNLIGVPGIGLETALRFVKSFSEDEI
LSRLQEIGRGDVQVLQRDVNLDCNYIPGSDESPWKTKVQHCSFCGHPGSKKAHHKFACQD
CSSTANEGCIQKPSGFKCNCSSCDLDNKEKEQKRNENWQIKVCRMIASEQNFPNNEITEM
YLNKHQQSDGDYHLTWSSPKTDMLVDYLAYYQHWEPSYTRQRMLPMLSTIFLRDVASNSK
DQLLCGQYEFDSIQRVKTRFGHQLYVINWKKTTREMSNEICIPSENPDMEQELRIADDGS
KDLLDEPEVLQIHIKDGCSFLSTEEDMELVQSAFPEKVSQFLRDKELKETKSSRKRSVKP
ENSESPRGVQPSITNFYRSSKVQATPGENESRSSKISADTSGERDKEPIRNYSKSARRKL
LFG

Transcript Sequence

Gene sequence data has not been registered.